1P9D

High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a


Sequence Similarity Clusters for the Entities in PDB 1P9D

Entity #1 | Chains: S
26S proteasome non-ATPase regulatory subunit 4 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 28374
95 % 3 3 24911
90 % 3 3 24072
70 % 3 3 21796
50 % 3 3 18736
40 % 3 3 16549
30 % 3 3 13862
Entity #2 | Chains: U
UV excision repair protein RAD23 homolog A protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 27004
95 % 2 3 23815
90 % 2 3 23018
70 % 2 4 18381
50 % 2 4 15951
40 % 2 4 14167
30 % 670 685 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2WYQ 1 A UV EXCISION REPAIR PROTEIN RAD23 HOMOLOG A UBIQUITIN-LIKE DOMAIN, RESIDUES 1-82 9606
2 1P9D 2 U UV excision repair protein RAD23 homolog A ubiquitin-like domain 9606
3 1P98 1 A UV excision repair protein RAD23 homolog A Ubiquitin-like domain 9606
4 1P1A 1 A UV excision repair protein RAD23 homolog B Ubiquitin-like domain 9606