1P9D

High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a


Sequence Similarity Clusters for the Entities in PDB 1P9D

Entity #1 | Chains: S
26S proteasome non-ATPase regulatory subunit 4 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 30765
95 % 3 3 25466
90 % 3 3 24615
70 % 3 3 22362
50 % 3 3 19347
40 % 3 3 17215
30 % 3 3 14762
Entity #2 | Chains: U
UV excision repair protein RAD23 homolog A protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 30415
95 % 2 3 25161
90 % 2 3 24326
70 % 2 4 18821
50 % 2 4 16323
40 % 2 4 14547
30 % 973 1046 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1UEL 2 B 26S proteasome non-ATPase regulatory subunit 4 ubiquitin-interacting motif (RESIDUES 201-248) 9606
2 1P9C 1 A 26S proteasome non-ATPase regulatory subunit 4 C-terminal ubiquitin-interacting motif 9606
3 1P9D 1 S 26S proteasome non-ATPase regulatory subunit 4 C-terminal ubiquitin-interacting motif, PUBS2 9606