1P9D

High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a


Sequence Similarity Clusters for the Entities in PDB 1P9D

Entity #1 | Chains: S
26S proteasome non-ATPase regulatory subunit 4 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 31126
95 % 3 3 25763
90 % 3 3 24896
70 % 3 3 22603
50 % 3 3 19541
40 % 3 3 17382
30 % 3 3 14907
Entity #2 | Chains: U
UV excision repair protein RAD23 homolog A protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 30783
95 % 2 3 25462
90 % 2 3 24609
70 % 2 4 19044
50 % 2 4 16506
40 % 2 4 14703
30 % 989 1062 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures