1P9D

High-resolution structure of the complex of HHR23A ubiquitin-like domain and the C-terminal ubiquitin-interacting motif of proteasome subunit S5a


Sequence Similarity Clusters for the Entities in PDB 1P9D

Entity #1 | Chains: S
26S proteasome non-ATPase regulatory subunit 4 protein, length: 45 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 30530
95 % 3 3 25299
90 % 3 3 24461
70 % 3 3 22228
50 % 3 3 19244
40 % 3 3 17129
30 % 3 3 14697
Entity #2 | Chains: U
UV excision repair protein RAD23 homolog A protein, length: 78 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 30181
95 % 2 3 24995
90 % 2 3 24174
70 % 2 4 18701
50 % 2 4 16229
40 % 2 4 14468
30 % 971 1044 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures