Sequence Similarity Clusters for the Entities in PDB 1P93

Entity #1 | Chains: A,B,C,D
Glucocorticoid receptor protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12099
95 % 21 21 1338 Flexibility: Medium
Max RMSD: 15.5, Avg RMSD: 5.2
PDBFlex
90 % 21 21 1361
70 % 50 50 520
50 % 164 164 196
40 % 164 164 213
30 % 164 164 222
Entity #2 | Chains: E,F,G,H
Nuclear receptor coactivator 2 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.