Sequence Similarity Clusters for the Entities in PDB 1P8Z

Entity #1 | Chains: G
Gelsolin precursor, plasma protein, length: 136 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 18 2937
95 % 24 29 1935 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 24 29 1973
70 % 24 29 1992
50 % 24 29 2015
40 % 24 29 1991
30 % 24 29 1891
Entity #2 | Chains: A
Actin, alpha skeletal muscle protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 62 150 8
95 % 89 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 91 211 9
70 % 95 216 11
50 % 95 223 15
40 % 98 242 26
30 % 101 262 41

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4CBU 2 G GELSOLIN RESIDUES 50-174 10090
2 5MVV 2 G Gelsolin 10090
3 3CIP 2 G Gelsolin Gelsolin Segment 1 (UNP RESIDUES 52-176) 9606
4 3CI5 2 G Gelsolin Gelsolin Segment 1 (UNP residues 52-176) 9606
5 1NM1 2 G Gelsolin DOMAIN 1 9606
6 1NLV 2 G Gelsolin DOMAIN 1 9606
7 1D4X 2 G GELSOLIN SEGMENT 1 9606
8 1YAG 2 G PROTEIN (GELSOLIN) SUBDOMAIN 1 9606
9 1NMD 2 G Gelsolin domain I 9606
10 1C0G 1 S PROTEIN (GELSOLIN SEGMENT 1) 9606
11 1YVN 2 G PROTEIN (GELSOLIN) CA(2+)-BOUND PROTEIN FRAGMENT 1 9606
12 1ESV 1 S GELSOLIN DOMAIN 1 9606
13 1EQY 1 S GELSOLIN DOMAIN 1 9606
14 4CBX 2 G GELSOLIN G1 DOMAIN, RESIDUES 50-174 10090
15 1MDU 1 A, D gelsolin precursor actin-severing 9606
16 1DEJ 1 S GELSOLIN SEGMENT 1 9606
17 5UBO 2 S Gelsolin unp residues 12-138 9606
18 3A5O 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
19 3A5M 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
20 1C0F 1 S GELSOLIN SEGMENT 1 9606
21 3A5N 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
22 3A5L 1 S Gelsolin GELSOLIN-LIKE 1, residues 53-176 9606
23 4CBW 2 G GELSOLIN G1 DOMAIN, RESIDUES 25-149 10090
24 1P8Z 1 G Gelsolin precursor, plasma 9606
25 5DD2 1 A, G Gelsolin UNP residues 55-188 9606
26 3CJB 2 G Gelsolin segment 1 9606
27 3CJC 3 G Gelsolin segment 1 9606
28 5H3M 1 A Gelsolin UNP residues 55-187 9606
29 5H3N 1 A Gelsolin UNP residues 55-187 9606