Sequence Similarity Clusters for the Entities in PDB 1P8V

Entity #1 | Chains: A
Platelet glycoprotein Ib alpha chain protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53046
95 % 7 13 3048
90 % 7 13 3092
70 % 7 13 3071
50 % 7 13 2998
40 % 7 13 2921
30 % 7 13 2742
Entity #2 | Chains: B
Prothrombin protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 298 328 43
95 % 299 329 58
90 % 299 329 63
70 % 300 331 72
50 % 300 331 96
40 % 300 331 120
30 % 300 331 134
Entity #3 | Chains: C
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 258 283 52
95 % 333 367 34
90 % 338 374 36
70 % 355 398 40
50 % 355 398 74
40 % 1451 1606 4
30 % 1570 1748 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.