Sequence Similarity Clusters for the Entities in PDB 1P8V

Entity #1 | Chains: A
Platelet glycoprotein Ib alpha chain protein, length: 279 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52319
95 % 7 13 2999
90 % 7 13 3043
70 % 7 13 3026
50 % 7 13 2954
40 % 7 13 2877
30 % 7 13 2698
Entity #2 | Chains: B
Prothrombin protein, length: 29 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 298 328 42
95 % 299 329 57
90 % 299 329 61
70 % 300 331 71
50 % 300 331 95
40 % 300 331 120
30 % 300 331 132
Entity #3 | Chains: C
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 258 283 51
95 % 333 367 33
90 % 338 374 35
70 % 355 398 40
50 % 355 398 70
40 % 1450 1605 4
30 % 1569 1747 6

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.