Sequence Similarity Clusters for the Entities in PDB 1P8L

Entity #1 | Chains: A
PBCV-1 DNA ligase protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57868
95 % 4 4 10668 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 6.9
PDBFlex
90 % 4 4 10542
70 % 4 4 10010
50 % 4 4 9064
40 % 4 4 8294
30 % 4 4 7310

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures