Sequence Similarity Clusters for the Entities in PDB 1P8L

Entity #1 | Chains: A
PBCV-1 DNA ligase protein, length: 304 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54095
95 % 4 4 9882 Flexibility: Medium
Max RMSD: 14.5, Avg RMSD: 6.9
PDBFlex
90 % 4 4 9771
70 % 4 4 9293
50 % 4 4 8437
40 % 4 4 7730
30 % 4 4 6820

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.