Sequence Similarity Clusters for the Entities in PDB 1P84

Entity #1 | Chains: A
Ubiquinol-cytochrome C reductase complex core protein I protein, length: 431 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 7472
95 % 6 8 5824
90 % 6 8 5826
70 % 6 8 5701
50 % 6 8 5357
40 % 6 8 5035
30 % 11 52 665
Entity #10 | Chains: J
Heavy Chain (Vh) Of Fv-Fragment protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5423
95 % 6 8 6047
90 % 6 8 6038
70 % 32 39 1039
50 % 329 504 8
40 % 557 844 5
30 % 629 970 7
Entity #11 | Chains: K
Light Chain (Vl) Of Fv-Fragment protein, length: 107 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5444
95 % 6 8 6067
90 % 6 8 6056
70 % 125 184 72
50 % 192 295 21
40 % 558 844 5
30 % 630 970 7
Entity #2 | Chains: B
Ubiquinol-cytochrome C reductase complex core protein 2 protein, length: 352 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5238
95 % 6 8 5870
90 % 6 8 5867
70 % 6 8 5734
50 % 6 8 5392
40 % 6 8 5064
30 % 6 8 4546
Entity #3 | Chains: C
cytochrome b protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 10960
95 % 6 8 5848
90 % 6 8 5849
70 % 6 8 5718
50 % 11 51 631
40 % 12 59 467
30 % 12 59 461
Entity #4 | Chains: D
Cytochrome c1, heme protein protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5310
95 % 6 8 5933
90 % 6 8 5928
70 % 6 8 5803
50 % 11 49 657
40 % 11 49 696
30 % 12 57 478
Entity #5 | Chains: E
Ubiquinol-cytochrome C reductase iron-sulfur subunit protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5370
95 % 6 8 5995
90 % 6 8 5987
70 % 6 8 5852
50 % 11 49 673
40 % 12 57 483
30 % 12 57 482
Entity #6 | Chains: F
Ubiquinol-cytochrome C reductase complex 17 kDa protein protein, length: 74 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 10174
95 % 4 6 10162
90 % 4 6 10038
70 % 4 6 9522
50 % 4 6 8665
40 % 4 6 7934
30 % 4 6 6997
Entity #7 | Chains: G
Ubiquinol-cytochrome C reductase complex 14 kDa protein protein, length: 125 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5424
95 % 6 8 6048
90 % 6 8 6039
70 % 6 8 5900
50 % 6 8 5536
40 % 6 8 5188
30 % 6 8 4657
Entity #8 | Chains: H
Ubiquinol-cytochrome C reductase complex ubiquinone-binding protein QP-C protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 6 8 5453
95 % 6 8 6075
90 % 6 8 6064
70 % 6 8 5921
50 % 6 8 5555
40 % 6 8 5204
30 % 6 8 4677
Entity #9 | Chains: I
Ubiquinol-cytochrome C reductase complex 7.3 kDa protein protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 23015
95 % 3 5 12649
90 % 3 5 12453
70 % 3 5 11691
50 % 3 5 10482
40 % 3 5 9509
30 % 3 5 8297

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.