Sequence Similarity Clusters for the Entities in PDB 1P7Q

Entity #1 | Chains: A
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 185 189 49
95 % 234 238 55
90 % 274 278 33
70 % 623 638 7
50 % 625 643 7
40 % 664 685 11
30 % 775 801 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 532 552 2
95 % 574 595 3
90 % 583 604 4
70 % 803 831 5
50 % 821 851 5
40 % 821 851 9
30 % 821 851 12
Entity #3 | Chains: C
POL polyprotein protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
leukocyte immunoglobulin-like receptor 1 protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 11953
95 % 7 7 7130
90 % 7 7 7098
70 % 10 10 4609
50 % 12 12 3879
40 % 24 24 1542
30 % 30 31 1160

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.