Sequence Similarity Clusters for the Entities in PDB 1P7Q

Entity #1 | Chains: A
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 193 197 52
95 % 242 246 58
90 % 290 294 36
70 % 676 692 6
50 % 678 697 6
40 % 726 748 10
30 % 840 868 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 579 600 2
95 % 622 644 3
90 % 631 653 4
70 % 856 885 4
50 % 876 907 3
40 % 876 907 9
30 % 876 907 14
Entity #3 | Chains: C
POL polyprotein protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
leukocyte immunoglobulin-like receptor 1 protein, length: 197 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 12891
95 % 7 7 7737
90 % 7 7 7689
70 % 10 10 4991
50 % 12 12 4172
40 % 24 24 1640
30 % 30 31 1236

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.