Sequence Similarity Clusters for the Entities in PDB 1P7K

Entity #1 | Chains: A,L
antibody light chain FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4990
95 % 1 26 1016 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 2.0
PDBFlex
90 % 2 37 757
70 % 204 2264 1
50 % 423 4587 1
40 % 423 4587 1
30 % 455 5394 1
Entity #2 | Chains: B,H
antibody heavy chain FAB protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 4940
95 % 1 6 5630 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 1.8
PDBFlex
90 % 1 11 3519
70 % 206 2222 2
50 % 424 4587 1
40 % 424 4587 1
30 % 456 5394 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.