Sequence Similarity Clusters for the Entities in PDB 1P7K

Entity #1 | Chains: A,L
antibody light chain FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5211
95 % 1 26 1050 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 2 37 779
70 % 221 2392 1
50 % 457 4843 1
40 % 457 4843 1
30 % 493 5705 1
Entity #2 | Chains: B,H
antibody heavy chain FAB protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5161
95 % 1 6 5858 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.8
PDBFlex
90 % 1 11 3646
70 % 222 2342 2
50 % 458 4843 1
40 % 458 4843 1
30 % 494 5705 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures