Sequence Similarity Clusters for the Entities in PDB 1P7K

Entity #1 | Chains: A,L
antibody light chain FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5337
95 % 1 26 1072 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 2 37 791
70 % 234 2474 1
50 % 484 5011 1
40 % 484 5011 1
30 % 549 5941 1
Entity #2 | Chains: B,H
antibody heavy chain FAB protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5289
95 % 1 6 5981 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.8
PDBFlex
90 % 1 11 3736
70 % 235 2424 2
50 % 485 5011 1
40 % 485 5011 1
30 % 550 5941 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures