Sequence Similarity Clusters for the Entities in PDB 1P7K

Entity #1 | Chains: A,L
antibody light chain FAB protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5070
95 % 1 26 1023 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.9
PDBFlex
90 % 2 37 761
70 % 206 2287 1
50 % 427 4633 1
40 % 427 4633 1
30 % 461 5461 1
Entity #2 | Chains: B,H
antibody heavy chain FAB protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 5021
95 % 1 6 5720 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.8
PDBFlex
90 % 1 11 3558
70 % 208 2244 2
50 % 428 4633 1
40 % 428 4633 1
30 % 462 5461 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.