Sequence Similarity Clusters for the Entities in PDB 1P6V

Entity #1 | Chains: B,D
45-MER rna, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,C
SsrA-binding protein protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21615
95 % 1 2 18654 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 1 2 18172
70 % 1 2 16834
50 % 1 2 14663
40 % 1 2 13049
30 % 1 2 11159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.