Sequence Similarity Clusters for the Entities in PDB 1P69

Entity #1 | Chains: A
Fiber protein protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 9172
95 % 4 4 7983 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 4 7915
70 % 4 4 7669
50 % 4 4 7048
40 % 22 22 988
30 % 37 39 437
Entity #2 | Chains: B
Coxsackievirus and adenovirus receptor protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 13 1297
95 % 9 13 1541 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 9 13 1568
70 % 9 13 1589
50 % 9 13 1636
40 % 9 13 1624
30 % 9 13 1605

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures