Sequence Similarity Clusters for the Entities in PDB 1P69

Entity #1 | Chains: A
Fiber protein protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63623
95 % 4 4 8037 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 4 7975
70 % 4 4 7731
50 % 4 4 7119
40 % 22 22 979
30 % 35 37 438
Entity #2 | Chains: B
Coxsackievirus and adenovirus receptor protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 13 1100
95 % 9 13 1485
90 % 9 13 1517
70 % 9 13 1522
50 % 9 13 1574
40 % 9 13 1591
30 % 9 13 1568

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures