Sequence Similarity Clusters for the Entities in PDB 1P69

Entity #1 | Chains: A
Fiber protein protein, length: 185 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 64467
95 % 4 4 8169 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 4 4 8101
70 % 4 4 7848
50 % 4 4 7233
40 % 22 22 987
30 % 35 37 443
Entity #2 | Chains: B
Coxsackievirus and adenovirus receptor protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 9 13 1116
95 % 9 13 1507
90 % 9 13 1537
70 % 9 13 1544
50 % 9 13 1602
40 % 9 13 1610
30 % 9 13 1591

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures