Sequence Similarity Clusters for the Entities in PDB 1P5Y

Entity #1 | Chains: A
Coat protein VP2 protein, length: 548 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49732
95 % 7 13 1183 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.7
PDBFlex
90 % 7 13 1211
70 % 7 13 1247
50 % 7 19 1135
40 % 7 19 1146
30 % 7 19 1127

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.