Sequence Similarity Clusters for the Entities in PDB 1P5V

Entity #1 | Chains: A
Chaperone protein Caf1M protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 3575
95 % 1 10 3682
90 % 2 11 3282
70 % 2 11 3251
50 % 2 11 3174
40 % 2 14 2016
30 % 4 42 587
Entity #2 | Chains: B
F1 capsule antigen protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 2842
95 % 1 10 3549
90 % 1 10 3598
70 % 1 10 3545
50 % 1 10 3461
40 % 1 10 3346
30 % 1 10 3122

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.