Sequence Similarity Clusters for the Entities in PDB 1P5V

Entity #1 | Chains: A
Chaperone protein Caf1M protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 8 3443
95 % 1 10 3580
90 % 2 11 3185
70 % 2 11 3154
50 % 2 11 3081
40 % 2 14 1963
30 % 3 41 575
Entity #2 | Chains: B
F1 capsule antigen protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 2750
95 % 1 10 3450
90 % 1 10 3500
70 % 1 10 3448
50 % 1 10 3365
40 % 1 10 3267
30 % 1 10 3045

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.