Sequence Similarity Clusters for the Entities in PDB 1P5U

Entity #1 | Chains: A
Chaperone protein Caf1M protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 8 3296
95 % 3 10 3432
90 % 4 11 3063
70 % 4 11 3042
50 % 4 11 2968
40 % 5 14 1880
30 % 7 41 548
Entity #2 | Chains: B
F1 capsule antigen protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 10 2628
95 % 3 10 3307
90 % 3 10 3355
70 % 3 10 3311
50 % 3 10 3232
40 % 3 10 3130
30 % 3 10 2917
Entity #3 | Chains: C
F1 capsule antigen protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 10 2628
95 % 4 10 3307
90 % 4 10 3355
70 % 4 10 3311
50 % 4 10 3232
40 % 4 10 3130
30 % 4 10 2917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.