Sequence Similarity Clusters for the Entities in PDB 1P5E

Entity #1 | Chains: A,C
Cell division protein kinase 2 protein, length: 299 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 270 364 21
95 % 279 379 34 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 2.2
PDBFlex
90 % 279 379 35
70 % 279 379 43
50 % 292 404 64
40 % 301 460 48
30 % 2134 3825 2
Entity #2 | Chains: B,D
Cyclin A2 protein, length: 258 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 25 86 162
95 % 38 105 148 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 42 109 154
70 % 42 109 172
50 % 42 109 210
40 % 42 109 232
30 % 45 115 230

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.