Sequence Similarity Clusters for the Entities in PDB 1P58

Entity #1 | Chains: A,B,C
Major envelope protein E protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11584
95 % 7 7 3107
90 % 7 7 3152
70 % 7 7 3122
50 % 20 20 981
40 % 20 20 1010
30 % 22 22 906
Entity #2 | Chains: D,E,F
Envelope protein M protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30513
95 % 5 5 5076
90 % 5 5 5090
70 % 5 5 4964
50 % 11 11 1909
40 % 17 17 1181
30 % 19 19 1045

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures