Sequence Similarity Clusters for the Entities in PDB 1P58

Entity #1 | Chains: A,B,C
Major envelope protein E protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 10962
95 % 7 7 2925
90 % 7 7 2972
70 % 7 7 2950
50 % 20 20 937
40 % 20 20 961
30 % 20 20 936
Entity #2 | Chains: D,E,F
Envelope protein M protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 28894
95 % 5 5 4759
90 % 5 5 4774
70 % 5 5 4679
50 % 11 11 1793
40 % 17 17 1123
30 % 17 17 1105

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.