Sequence Similarity Clusters for the Entities in PDB 1P58

Entity #1 | Chains: A,B,C
Major envelope protein E protein, length: 495 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 11782
95 % 7 7 3146
90 % 7 7 3192
70 % 7 7 3154
50 % 21 21 943
40 % 21 21 973
30 % 23 23 871
Entity #2 | Chains: D,E,F
Envelope protein M protein, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 30926
95 % 5 5 5153
90 % 5 5 5172
70 % 5 5 5042
50 % 11 11 1942
40 % 18 18 1135
30 % 20 20 1013

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures