Sequence Similarity Clusters for the Entities in PDB 1P4Q

Entity #1 | Chains: A
Cbp/p300-interacting transactivator 2 protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 73562
95 % 1 1 51127
90 % 1 1 48496
70 % 1 1 42532
50 % 1 1 36270
40 % 1 1 31917
30 % 1 1 26973
Entity #2 | Chains: B
E1A-associated protein p300 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 47265
95 % 1 2 35347
90 % 5 7 10715
70 % 5 7 10168
50 % 5 7 9205
40 % 5 7 8420
30 % 10 13 4292

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures