Sequence Similarity Clusters for the Entities in PDB 1P4Q

Entity #1 | Chains: A
Cbp/p300-interacting transactivator 2 protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64933
95 % 1 1 52658
90 % 1 1 49932
70 % 1 1 43681
50 % 1 1 37042
40 % 1 1 32411
30 % 1 1 25994
Entity #2 | Chains: B
E1A-associated protein p300 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 37642
95 % 1 2 31958
90 % 5 7 10944
70 % 5 7 10345
50 % 5 7 9307
40 % 10 13 4610
30 % 10 13 4328

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures