Sequence Similarity Clusters for the Entities in PDB 1P4N

Entity #1 | Chains: A
FemX protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 13558
95 % 4 7 11177 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.5
PDBFlex
90 % 4 7 11006
70 % 4 7 10418
50 % 4 7 9386
40 % 4 7 8491
30 % 4 7 7343
Entity #2 | Chains: B
UDP-MurNAc-pentapeptide protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures