Sequence Similarity Clusters for the Entities in PDB 1P4L

Entity #1 | Chains: A
MHC CLASS I H-2KB HEAVY CHAIN protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 47 49 331
95 % 63 65 331
90 % 68 70 332
70 % 630 644 7
50 % 632 649 7
40 % 671 691 11
30 % 782 807 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 76 78 232
95 % 207 212 65
90 % 207 212 69
70 % 810 837 5
50 % 828 857 5
40 % 828 857 9
30 % 828 857 13
Entity #3 | Chains: P
Ovalbumin peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
LY49-C protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42381
95 % 3 5 9896
90 % 3 5 9773
70 % 3 5 9280
50 % 6 8 4522
40 % 6 8 4307
30 % 186 205 100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.