Sequence Similarity Clusters for the Entities in PDB 1P4D

Entity #1 | Chains: A,B,C
TraI protein protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26264
95 % 3 4 8797 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 3 4 8724
70 % 3 4 8391
50 % 3 4 7642
40 % 3 4 7050
30 % 10 13 2551

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.