Sequence Similarity Clusters for the Entities in PDB 1P4D

Entity #1 | Chains: A,B,C
TraI protein protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 26825
95 % 3 4 8944 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.4
PDBFlex
90 % 3 4 8868
70 % 3 4 8528
50 % 3 4 7772
40 % 3 4 7170
30 % 10 13 2608

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures