Sequence Similarity Clusters for the Entities in PDB 1P4B

Entity #1 | Chains: L
Antibody Variable light chain protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 44377
95 % 1 2 33355
90 % 1 2 31892
70 % 1 2 28487
50 % 1 2 24325
40 % 538 897 5
30 % 602 1023 7
Entity #2 | Chains: H
Antibody Variable heavy chain protein, length: 124 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66357
95 % 1 2 33798
90 % 1 2 32318
70 % 21 36 1231
50 % 327 549 8
40 % 539 897 5
30 % 603 1023 7
Entity #3 | Chains: P
GCN4(7P-14P) peptide protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.