Sequence Similarity Clusters for the Entities in PDB 1P42

Entity #1 | Chains: A,B
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 1589
95 % 10 19 1832 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 10 19 1870
70 % 10 19 1899
50 % 10 19 1927
40 % 10 19 1935
30 % 32 48 639

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures