Sequence Similarity Clusters for the Entities in PDB 1P42

Entity #1 | Chains: A,B
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 2028
95 % 10 19 2010 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 10 19 2054
70 % 10 19 2075
50 % 10 19 2104
40 % 10 19 2080
30 % 32 48 708

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures