Sequence Similarity Clusters for the Entities in PDB 1P42

Entity #1 | Chains: A,B
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase protein, length: 270 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 17 1612
95 % 10 19 1883 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 10 19 1924
70 % 10 19 1940
50 % 10 19 1967
40 % 10 19 1966
30 % 32 48 648

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures