Sequence Similarity Clusters for the Entities in PDB 1P3Q

Entity #1 | Chains: Q,R
Vacuolar protein sorting-associated protein VPS9 protein, length: 54 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48221
95 % 1 1 36032
90 % 1 2 23770
70 % 1 2 21665
50 % 1 2 18774
40 % 1 2 16716
30 % 1 2 14330
Entity #2 | Chains: U,V
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 78 311 6
95 % 101 380 5
90 % 111 407 6
70 % 113 427 8
50 % 117 448 12
40 % 119 472 16
30 % 280 1019 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.