Sequence Similarity Clusters for the Entities in PDB 1P39

Entity #1 | Chains: A
VP39 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 5579
95 % 9 22 2438 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 9 22 2495
70 % 9 22 2483
50 % 9 22 2475
40 % 9 22 2444
30 % 9 22 2337

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.