Sequence Similarity Clusters for the Entities in PDB 1P39

Entity #1 | Chains: A
VP39 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 11 5772
95 % 9 22 2530 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 9 22 2590
70 % 9 22 2580
50 % 9 22 2565
40 % 9 22 2526
30 % 9 22 2406

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures