Sequence Similarity Clusters for the Entities in PDB 1P31

Entity #1 | Chains: A,B
UDP-N-acetylmuramate--alanine ligase protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 8049
95 % 3 4 8511 Flexibility: Medium
Max RMSD: 7.8, Avg RMSD: 3.4
PDBFlex
90 % 3 4 8450
70 % 3 4 8128
50 % 3 6 5154
40 % 3 6 4873
30 % 3 7 4177

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures