Sequence Similarity Clusters for the Entities in PDB 1P2Q

Entity #1 | Chains: A,C
Chymotrypsinogen A protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 26 836
95 % 9 26 1152 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.7
PDBFlex
90 % 9 26 1175
70 % 9 26 1204
50 % 9 26 1259
40 % 919 1864 4
30 % 925 1886 6
Entity #2 | Chains: B,D
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 31093
95 % 46 90 261 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 51 95 265
70 % 64 115 179
50 % 73 149 187
40 % 75 163 183
30 % 75 163 195

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures