Sequence Similarity Clusters for the Entities in PDB 1P2K

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 188 389 37
95 % 211 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 211 448 34
70 % 232 532 19
50 % 246 683 14
40 % 464 1698 4
30 % 482 1848 6
Entity #2 | Chains: I
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30170
95 % 21 90 250 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 26 95 253
70 % 33 115 176
50 % 39 148 178
40 % 39 162 176
30 % 39 162 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures