Sequence Similarity Clusters for the Entities in PDB 1P2K

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 188 383 39
95 % 211 442 30 Flexibility: No
Max RMSD: 2.7, Avg RMSD: 0.4
PDBFlex
90 % 211 442 32
70 % 232 526 19
50 % 246 677 13
40 % 456 1669 4
30 % 474 1811 6
Entity #2 | Chains: I
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28856
95 % 21 90 232
90 % 26 95 236
70 % 33 115 173
50 % 39 148 170
40 % 39 162 171
30 % 39 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.