Sequence Similarity Clusters for the Entities in PDB 1P2K

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 188 384 40
95 % 211 443 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 211 443 34
70 % 232 527 19
50 % 246 678 14
40 % 464 1685 4
30 % 482 1834 6
Entity #2 | Chains: I
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29799
95 % 21 90 240 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 26 95 245
70 % 33 115 173
50 % 39 148 174
40 % 39 162 173
30 % 39 162 188

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.