Sequence Similarity Clusters for the Entities in PDB 1P2K

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 188 383 40
95 % 211 442 31 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.4
PDBFlex
90 % 211 442 33
70 % 232 526 18
50 % 246 677 14
40 % 463 1682 4
30 % 481 1831 6
Entity #2 | Chains: I
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 29260
95 % 21 90 238 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 26 95 241
70 % 33 115 173
50 % 39 148 173
40 % 39 162 172
30 % 39 162 186

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.