Sequence Similarity Clusters for the Entities in PDB 1P2I

Entity #1 | Chains: A
Trypsinogen, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 250 412 39
95 % 277 471 18 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 277 471 20
70 % 305 557 19
50 % 322 708 14
40 % 600 1863 4
30 % 601 1885 6
Entity #2 | Chains: I
Pancreatic trypsin inhibitor protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 25431
95 % 26 90 260 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 31 95 264
70 % 39 115 179
50 % 46 149 187
40 % 47 163 182
30 % 47 163 194

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures