Sequence Similarity Clusters for the Entities in PDB 1P2D

Entity #1 | Chains: A
Glycogen phosphorylase, muscle form protein, length: 842 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 67 202 117
95 % 67 206 144 Flexibility: Low
Max RMSD: 5.0, Avg RMSD: 1.2
PDBFlex
90 % 67 206 151
70 % 69 226 159
50 % 69 227 186
40 % 73 246 171
30 % 73 246 191

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures