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An Information Portal to 110790 Biological Macromolecular Structures

crystal structure analysis of an anti-lysozyme antibody
Sequence Clustering and Redundancy Reduction Results
1P2C
Sequence Clusters for the Sequence Entities in PDB 1P2C
Entity #1: Chains: A,D - light chain anti-lysozyme antibody F10.6.6 protein, length: 212 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 17010
95% 9 22 1742
90% 11 26 1321
70% 330 1434 3
50% 816 3425 1
40% 817 3426 1
30% 893 4043 1
Entity #2: Chains: B,E - heavy chain VH+CH1 anti-lysozyme antibody F10.6.6 protein, length: 218 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 32531
95% 2 2 14807
90% 3 12 2831
70% 396 1656 1
50% 817 3425 1
40% 818 3426 1
30% 894 4043 1
Entity #3: Chains: C,F - Lysozyme C protein, length: 129 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 413 542 3
95% 463 595 4
90% 473 612 5
70% 669 827 6
50% 673 836 6
40% 692 870 10
30% 692 870 15
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.