Sequence Similarity Clusters for the Entities in PDB 1P2C

Entity #1 | Chains: A,D
light chain anti-lysozyme antibody F10.6.6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19687
95 % 11 25 1727
90 % 13 32 1255
70 % 407 1729 2
50 % 1018 4220 1
40 % 1018 4221 1
30 % 1117 4972 1
Entity #2 | Chains: B,E
heavy chain VH+CH1 anti-lysozyme antibody F10.6.6 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37497
95 % 2 2 17005
90 % 3 12 3358
70 % 491 2041 1
50 % 1019 4220 1
40 % 1019 4221 1
30 % 1118 4972 1
Entity #3 | Chains: C,F
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 482 618 3
95 % 532 671 4
90 % 542 688 5
70 % 738 904 6
50 % 742 912 6
40 % 761 946 10
30 % 761 946 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.