Sequence Similarity Clusters for the Entities in PDB 1P2C

Entity #1 | Chains: A,D
light chain anti-lysozyme antibody F10.6.6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19114
95 % 11 24 1720
90 % 13 28 1358
70 % 392 1653 3
50 % 978 4026 1
40 % 979 4028 1
30 % 1076 4764 1
Entity #2 | Chains: B,E
heavy chain VH+CH1 anti-lysozyme antibody F10.6.6 protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 36453
95 % 2 2 16534
90 % 3 12 3223
70 % 475 1952 1
50 % 979 4026 1
40 % 980 4028 1
30 % 1077 4764 1
Entity #3 | Chains: C,F
Lysozyme C protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 470 605 3
95 % 520 658 4
90 % 530 675 5
70 % 726 891 6
50 % 730 899 6
40 % 749 933 10
30 % 749 933 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.