Sequence Similarity Clusters for the Entities in PDB 1P27

Entity #1 | Chains: A,C
Mago nashi protein homolog protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 5294
95 % 1 6 5915
90 % 3 10 3571
70 % 3 10 3513
50 % 3 10 3438
40 % 3 10 3327
30 % 3 10 3117
Entity #2 | Chains: B,D
RNA-binding protein 8A protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 43378
95 % 1 1 32428
90 % 1 1 31045
70 % 1 1 27776
50 % 2 2 17366
40 % 2 2 15480
30 % 2 2 13241

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.