Sequence Similarity Clusters for the Entities in PDB 1P22

Entity #1 | Chains: A
F-box/WD-repeat protein 1A protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 52507
95 % 1 1 38422
90 % 1 1 36720
70 % 1 1 32671
50 % 1 1 27983
40 % 1 1 24763
30 % 1 1 21105
Entity #2 | Chains: B
Skp1 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65211
95 % 6 8 4206 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 6 8 4235
70 % 14 19 1967
50 % 26 35 765
40 % 26 35 798
30 % 26 35 789
Entity #3 | Chains: C
Beta-catenin protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 49364
95 % 1 2 36932
90 % 1 2 35276
70 % 1 2 31400
50 % 1 2 26880
40 % 1 2 23777
30 % 1 2 20249

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.