Sequence Similarity Clusters for the Entities in PDB 1P22

Entity #1 | Chains: A
F-box/WD-repeat protein 1A protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 51056
95 % 1 1 37364
90 % 1 1 35735
70 % 1 1 31875
50 % 1 1 27336
40 % 1 1 24192
30 % 1 1 20602
Entity #2 | Chains: B
Skp1 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63386
95 % 5 7 4322 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 5 7 4346
70 % 13 18 1994
50 % 25 34 750
40 % 25 34 777
30 % 25 34 769
Entity #3 | Chains: C
Beta-catenin protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 48042
95 % 1 2 35958
90 % 1 2 34372
70 % 1 2 30680
50 % 1 2 26301
40 % 1 2 23267
30 % 1 2 19798

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.