Sequence Similarity Clusters for the Entities in PDB 1P22

Entity #1 | Chains: A
F-box/WD-repeat protein 1A protein, length: 435 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53251
95 % 1 1 38955
90 % 1 1 37211
70 % 1 1 33084
50 % 1 1 28335
40 % 1 1 25063
30 % 1 1 21361
Entity #2 | Chains: B
Skp1 protein, length: 145 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66108
95 % 8 10 3246 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 8 10 3289
70 % 16 21 1701
50 % 28 38 723
40 % 28 38 752
30 % 28 38 750
Entity #3 | Chains: C
Beta-catenin protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 50062
95 % 1 2 37445
90 % 1 2 35747
70 % 1 2 31791
50 % 1 2 27209
40 % 1 2 24060
30 % 1 2 20487

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures