Sequence Similarity Clusters for the Entities in PDB 1P1Z

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 49 303
95 % 65 65 328
90 % 70 70 329
70 % 631 638 7
50 % 633 643 7
40 % 673 685 11
30 % 786 801 14
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 131 131 91
95 % 212 212 65
90 % 212 212 69
70 % 813 831 5
50 % 832 851 5
40 % 832 851 9
30 % 832 851 12
Entity #3 | Chains: P
Ovalbumin peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
LY49-C antigen protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62457
95 % 4 5 9806
90 % 4 5 9681
70 % 4 5 9181
50 % 7 8 4485
40 % 7 8 4275
30 % 192 205 95

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.