Sequence Similarity Clusters for the Entities in PDB 1P1Z

Entity #1 | Chains: A
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 49 49 367
95 % 65 65 344
90 % 70 70 349
70 % 657 664 7
50 % 659 669 7
40 % 705 717 10
30 % 819 834 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 131 131 95
95 % 213 213 66
90 % 213 213 70
70 % 841 859 5
50 % 860 879 5
40 % 860 879 9
30 % 860 879 14
Entity #3 | Chains: P
Ovalbumin peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
LY49-C antigen protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64477
95 % 4 5 10127
90 % 4 5 9993
70 % 4 5 9486
50 % 7 8 4634
40 % 7 8 4403
30 % 192 206 102

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.