Sequence Similarity Clusters for the Entities in PDB 1P1X

Entity #1 | Chains: A,B
Deoxyribose-phosphate aldolase protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12602
95 % 7 7 6386 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 16 16 2242
70 % 17 17 1861
50 % 19 19 1537
40 % 19 19 1550
30 % 35 35 566

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures