Sequence Similarity Clusters for the Entities in PDB 1P1Q

Entity #1 | Chains: A,B,C
Glutamate receptor 2 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 8059
95 % 126 161 61 Flexibility: Low
Max RMSD: 3.5, Avg RMSD: 1.1
PDBFlex
90 % 141 184 61
70 % 141 184 74
50 % 212 278 37
40 % 213 279 51
30 % 267 360 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures