Sequence Similarity Clusters for the Entities in PDB 1P1M

Entity #1 | Chains: A
Hypothetical protein TM0936 protein, length: 406 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 26628
95 % 1 3 22513 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 3 21847
70 % 1 3 20033
50 % 1 3 17375
40 % 1 3 15501
30 % 1 9 4947

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures