Sequence Similarity Clusters for the Entities in PDB 1P16

Entity #1 | Chains: A,B
mRNA capping enzyme alpha subunit protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 33234
95 % 1 1 26658
90 % 1 1 25769
70 % 1 1 23397
50 % 1 1 20155
40 % 1 1 17896
30 % 1 1 15315
Entity #2 | Chains: C,D
phosphorylated peptide from C-terminal of RNA polymerase II protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24480
95 % 2 2 20903
90 % 2 2 20319
70 % 2 2 18657
50 % 2 2 16228
40 % 2 2 14496
30 % 2 2 12425

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.