Sequence Similarity Clusters for the Entities in PDB 1P16

Entity #1 | Chains: A,B
mRNA capping enzyme alpha subunit protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 31857
95 % 1 1 25561
90 % 1 1 24726
70 % 1 1 22535
50 % 1 1 19478
40 % 1 1 17300
30 % 1 1 14816
Entity #2 | Chains: C,D
phosphorylated peptide from C-terminal of RNA polymerase II protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23433
95 % 2 2 19996
90 % 2 2 19457
70 % 2 2 17949
50 % 2 2 15671
40 % 2 2 14008
30 % 2 2 12028

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.