Sequence Similarity Clusters for the Entities in PDB 1P16

Entity #1 | Chains: A,B
mRNA capping enzyme alpha subunit protein, length: 395 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 32145
95 % 1 1 25787
90 % 1 1 24944
70 % 1 1 22730
50 % 1 1 19619
40 % 1 1 17422
30 % 1 1 14907
Entity #2 | Chains: C,D
phosphorylated peptide from C-terminal of RNA polymerase II protein, length: 21 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 23643
95 % 2 2 20178
90 % 2 2 19629
70 % 2 2 18101
50 % 2 2 15788
40 % 2 2 14109
30 % 2 2 12100

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.