Sequence Similarity Clusters for the Entities in PDB 1P13

Entity #1 | Chains: A,B
Proto-oncogene tyrosine-protein kinase Src protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 10 2685
95 % 14 55 667 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 14 55 694
70 % 15 63 623
50 % 16 79 519
40 % 25 134 226
30 % 35 231 151
Entity #2 | Chains: C,D
Peptide protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.