Sequence Similarity Clusters for the Entities in PDB 1P12

Entity #1 | Chains: E
ALPHA-LYTIC PROTEASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 18 3119
95 % 16 48 1142 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 16 48 1181
70 % 17 50 1049
50 % 18 51 1039
40 % 18 51 1080
30 % 18 51 1123
Entity #2 | Chains: I
PHOSPHONATE ESTER INHIBITOR protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures