Sequence Similarity Clusters for the Entities in PDB 1P11

Entity #1 | Chains: E
ALPHA-LYTIC PROTEASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 2823
95 % 17 47 1000 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 17 47 1030
70 % 17 47 1063
50 % 45 85 562
40 % 45 85 602
30 % 45 85 591
Entity #2 | Chains: P
PHOSPHONATE ESTER INHIBITOR A protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I
PHOSPHONATE ESTER INHIBITOR B(TRANSITION STATE) protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.