Sequence Similarity Clusters for the Entities in PDB 1P0S

Entity #1 | Chains: L
Coagulation factor X precursor protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 40 1192
95 % 40 40 1418 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 40 40 1445
70 % 40 40 1453
50 % 68 74 791
40 % 68 74 822
30 % 73 79 769
Entity #2 | Chains: H
Coagulation factor X precursor protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 124 134 211
95 % 124 134 269 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 124 134 280
70 % 124 135 320
50 % 679 708 14
40 % 1734 1873 4
30 % 1745 1887 7
Entity #3 | Chains: E
Ecotin precursor protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 19957
95 % 16 18 2068 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 16 18 2127
70 % 16 19 1829
50 % 16 19 1844
40 % 16 19 1826
30 % 16 19 1772

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures