Sequence Similarity Clusters for the Entities in PDB 1P0S

Entity #1 | Chains: L
Coagulation factor X precursor protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 39 1022
95 % 40 40 1353 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.3
PDBFlex
90 % 40 40 1379
70 % 40 40 1398
50 % 68 74 760
40 % 68 74 796
30 % 68 74 788
Entity #2 | Chains: H
Coagulation factor X precursor protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 111 119 215
95 % 124 134 257 Flexibility: No
Max RMSD: 2.3, Avg RMSD: 0.5
PDBFlex
90 % 124 134 271
70 % 124 135 307
50 % 658 683 14
40 % 1579 1698 4
30 % 1711 1848 6
Entity #3 | Chains: E
Ecotin precursor protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 23002
95 % 16 18 2001 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.0
PDBFlex
90 % 16 18 2047
70 % 16 19 1728
50 % 16 19 1775
40 % 16 19 1783
30 % 16 19 1729

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures