Sequence Similarity Clusters for the Entities in PDB 1OZJ

Entity #1 | Chains: C
Smad binding element dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
Smad binding element dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A,B
SMAD 3 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 20822
95 % 1 2 17934
90 % 1 2 17469
70 % 1 2 16188
50 % 1 7 2860
40 % 1 7 2790
30 % 1 7 2621

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.