Sequence Similarity Clusters for the Entities in PDB 1OZB

Entity #1 | Chains: A,B,C,D,E,F,G,H
Protein-export protein secB protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6206
95 % 2 2 6361 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 6351
70 % 2 2 6188
50 % 2 2 5778
40 % 2 2 5390
30 % 2 2 4741
Entity #2 | Chains: I,J
Preprotein translocase secA subunit protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43675
95 % 1 1 36529 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 34873
70 % 1 1 31004
50 % 1 1 26386
40 % 1 1 23151
30 % 1 1 19970

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures