Sequence Similarity Clusters for the Entities in PDB 1OZB

Entity #1 | Chains: A,B,C,D,E,F,G,H
Protein-export protein secB protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5265
95 % 2 2 5951 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 5950
70 % 2 2 5806
50 % 2 2 5457
40 % 2 2 5124
30 % 2 2 4614
Entity #2 | Chains: I,J
Preprotein translocase secA subunit protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 49382
95 % 1 1 36948 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 35291
70 % 1 1 31416
50 % 1 1 26896
40 % 1 1 23793
30 % 1 1 20265

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.