Sequence Similarity Clusters for the Entities in PDB 1OZB

Entity #1 | Chains: A,B,C,D,E,F,G,H
Protein-export protein secB protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 5481
95 % 2 2 6154 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.5
PDBFlex
90 % 2 2 6159
70 % 2 2 6001
50 % 2 2 5633
40 % 2 2 5286
30 % 2 2 4761
Entity #2 | Chains: I,J
Preprotein translocase secA subunit protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51006
95 % 1 1 38114 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 36355
70 % 1 1 32315
50 % 1 1 27625
40 % 1 1 24435
30 % 1 1 20798

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures