Sequence Similarity Clusters for the Entities in PDB 1OYV

Entity #1 | Chains: A,B
Subtilisin Carlsberg protein, length: 274 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 20 2259
95 % 29 29 1618 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 29 29 1650
70 % 89 92 493
50 % 110 115 446
40 % 219 229 199
30 % 230 244 196
Entity #2 | Chains: I
Wound-induced proteinase inhibitor-II protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 16483
95 % 2 2 15368 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 2 2 15088
70 % 2 2 14137
50 % 2 2 12534
40 % 2 2 11353
30 % 2 2 9854

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures