Sequence Similarity Clusters for the Entities in PDB 1OYR

Entity #1 | Chains: A,B,C,D,E,F
Ribonuclease PH protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5375
95 % 3 3 5694 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 3 5700
70 % 4 4 5152
50 % 11 11 2572
40 % 11 11 2524
30 % 36 49 521

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3DD6 1 A Ribonuclease PH 1392 2.7.7.56 | Details
2 1R6L 1 A Ribonuclease PH 287 2.7.7.56 | Details
3 3B4T 1 A, B, C, D, E, F Ribonuclease PH 1773 2.7.7.56 | Details
4 1R6M 1 A Ribonuclease PH 287 2.7.7.56 | Details
5 1UDS 1 A Ribonuclease PH 63363 2.7.7.56 | Details
6 1UDO 1 A Ribonuclease PH 63363 2.7.7.56 | Details
7 1UDQ 1 A Ribonuclease PH 63363 2.7.7.56 | Details
8 1UDN 1 A Ribonuclease PH 63363 2.7.7.56 | Details
9 1OYS 1 A Ribonuclease PH 1423 2.7.7.56 | Details
10 1OYP 1 A, B, C, D, E, F Ribonuclease PH 1423 2.7.7.56 | Details
11 1OYR 1 A, B, C, D, E, F Ribonuclease PH 1423 2.7.7.56 | Details