Sequence Similarity Clusters for the Entities in PDB 1OYR

Entity #1 | Chains: A,B,C,D,E,F
Ribonuclease PH protein, length: 245 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 5170
95 % 3 3 5469 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 3 3 5497
70 % 4 4 4967
50 % 11 11 2489
40 % 11 11 2449
30 % 36 49 502

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2JE6 2 B EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
2 3DD6 1 A Ribonuclease PH 1392 2.7.7.56 | Details
3 4BA1 2 B PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
4 2PO1 2 A Probable exosome complex exonuclease 1 29292 3.1.13 | Details
5 1R6L 1 A Ribonuclease PH 287 2.7.7.56 | Details
6 3B4T 1 A, B, C, D, E, F Ribonuclease PH 1773 2.7.7.56 | Details
7 2PNZ 1 A Probable exosome complex exonuclease 1 29292 3.1.13 | Details
8 1R6M 1 A Ribonuclease PH 287 2.7.7.56 | Details
9 2PO0 1 A Probable exosome complex exonuclease 1 29292 3.1.13 | Details
10 2PO2 1 A Probable exosome complex exonuclease 1 29292 3.1.13 | Details
11 2JEA 2 B EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
12 3M7N 2 D, E, F Probable exosome complex exonuclease 1 2234 3.1.13 | Details
13 2JEB 2 B EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
14 1UDS 1 A Ribonuclease PH 63363 2.7.7.56 | Details
15 4BA2 2 B PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
16 1UDO 1 A Ribonuclease PH 63363 2.7.7.56 | Details
17 1UDQ 1 A Ribonuclease PH 63363 2.7.7.56 | Details
18 1UDN 1 A Ribonuclease PH 63363 2.7.7.56 | Details
19 4IFD 2 B Exosome complex component SKI6 4932 3.5.1.2 | Details
20 2WNR 2 B, D, F PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 145262 3.1.13 | Details
21 5JEA 2 B Exosome complex component SKI6 4932 3.5.1.2 | Details
22 1OYS 1 A Ribonuclease PH 1423 2.7.7.56 | Details
23 2BA0 2 D, E, F Archaeal exosome RNA binding protein RRP41 2234 3.1.13 | Details
24 3L7Z 2 B, E, H Probable exosome complex exonuclease 1 2287 3.1.13 | Details
25 2BA1 2 D, E, F Archaeal exosome complex exonuclease RRP41 2234 3.1.13 | Details
26 2BR2 2 B, D, F, H, J, L, N, P, R, T, V, X EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
27 3M85 2 D, E, F Probable exosome complex exonuclease 1 2234 3.1.13 | Details
28 2WP8 2 B EXOSOME COMPLEX COMPONENT SKI6 4932 3.5.1.2 | Details
29 5K36 2 B Exosome complex component SKI6 4932 3.5.1.2 | Details
30 2C37 2 B, D, F, H, J, L, N, P, R, T, V, X PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
31 5OKZ 3 B, L, V, f Exosome complex component SKI6 4932 3.5.1.2 | Details
32 5VZJ 2 B Exosome complex component SKI6 4932 3.5.1.2 | Details
33 1OYP 1 A, B, C, D, E, F Ribonuclease PH 1423 2.7.7.56 | Details
34 4OO1 2 B Exosome complex component SKI6 4932 3.5.1.2 | Details
35 2C38 2 B, D, F, H, J, L, N, P, R, T, V, X PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
36 1OYR 1 A, B, C, D, E, F Ribonuclease PH 1423 2.7.7.56 | Details
37 2C39 2 B, D, F, H, J, L, N, P, R, T, V, X PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 2287 3.1.13 | Details
38 2NN6 2 B Exosome complex exonuclease RRP41 9606 3.1.13 | Details
39 2NN6 4 D Exosome complex exonuclease RRP46 9606 3.1.13 | Details
40 5C0X 2 B Exosome complex component SKI6 Exosome complex component RRP41 4932 3.5.1.2 | Details
41 5C0W 2 B Exosome complex component SKI6 Exosome complex component RRP41 4932 3.5.1.2 | Details
42 6H25 2 B Exosome complex component RRP41 9606
43 6H25 4 D Exosome complex component RRP46 9606
44 6D6Q 2 B Exosome complex component RRP41 9606
45 6D6Q 4 D Exosome complex component RRP46 9606
46 6D6R 2 B Exosome complex component RRP41 9606
47 6D6R 4 D Exosome complex component RRP46 9606
48 6FSZ 3 BB Exosome complex component SKI6 4932 3.5.1.2 | Details
49 5G06 2 B EXOSOME COMPLEX COMPONENT SKI6 4932 3.5.1.2 | Details