Sequence Similarity Clusters for the Entities in PDB 1OYQ

Entity #1 | Chains: A
Trypsin, cationic protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 342 425 40
95 % 374 471 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 374 471 22
70 % 419 558 18
50 % 457 710 13
40 % 928 1894 3
30 % 933 1908 5

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures