Sequence Similarity Clusters for the Entities in PDB 1OYN

Entity #1 | Chains: A,B,C,D
cAMP-specific phosphodiesterase PDE4D2 protein, length: 360 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 20 32 263
95 % 25 40 261 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 25 40 275
70 % 43 79 176
50 % 43 79 217
40 % 43 79 237
30 % 144 256 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.