Sequence Similarity Clusters for the Entities in PDB 1OYF

Entity #1 | Chains: A
Phospholipase A2 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 54 67 471
95 % 56 69 579 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 57 70 598
70 % 94 119 255
50 % 142 183 153
40 % 231 309 103
30 % 231 309 116
Entity #2 | Chains: B
Phospholipase A2 protein, length: 121 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 55 67 471
95 % 57 69 579 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 58 70 598
70 % 95 119 255
50 % 143 183 153
40 % 232 309 103
30 % 232 309 116

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures